Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AC067750.1-201ENST00000608826 6545 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 ST20-AS1-201ENST00000560255 4223 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 RPL5P21-201ENST00000404620 815 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 DUX4L26-201ENST00000489078 1255 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 KRT18P31-201ENST00000506277 1292 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AC011467.4-201ENST00000594891 528 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AL355877.3-201ENST00000622820 899 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AC116407.4-201ENST00000623319 1061 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.45□□□□□ -0.26
SMIM4Q8WVI0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 PMS2P7-201ENST00000506558 1336 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 FAM185BP-201ENST00000443595 716 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AL031432.2-201ENST00000566714 459 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AL928711.1-201ENST00000570165 459 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AC138894.3-201ENST00000603787 634 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AL078644.1-201ENST00000609881 752 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AL645728.2-201ENST00000641974 660 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 AC152010.1-201ENST00000415779 2006 ntBASIC13.44□□□□□ -0.26
SMIM4Q8WVI0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms