Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 KLF2P3-201ENST00000451977 1087 ntBASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AL138828.2-201ENST00000615812 383 ntBASIC14.71□□□□□ -0.05
NUP43Q8NFH3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NUP43Q8NFH3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
NUP43Q8NFH3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NUP43Q8NFH3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NUP43Q8NFH3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NUP43Q8NFH3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NUP43Q8NFH3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
NUP43Q8NFH3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AC069120.2-201ENST00000524091 540 ntBASIC14.7□□□□□ -0.06
NUP43Q8NFH3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TEX28P1-201ENST00000613479 1221 ntBASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TEX28P2-201ENST00000617764 1221 ntBASIC14.7□□□□□ -0.06
NUP43Q8NFH3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AC073592.8-201ENST00000624126 511 ntBASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AL596257.1-201ENST00000641463 2694 ntBASIC14.7□□□□□ -0.06
NUP43Q8NFH3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUP43Q8NFH3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.69□□□□□ -0.06
NUP43Q8NFH3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms