Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL442647.2-201ENST00000429864 857 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 VDAC1P7-201ENST00000462417 847 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 BRI3BPP1-201ENST00000594224 787 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 HYMAI-201ENST00000635591 3347 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 KRT8P22-201ENST00000562317 1415 ntBASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCN4BQ8IWT1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 U91328.1-201ENST00000437528 223 ntBASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 AC244107.1-201ENST00000442033 332 ntBASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 CU634019.7-201ENST00000624153 1185 ntBASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 FP236241.2-201ENST00000624906 1185 ntBASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 AL391005.1-201ENST00000623953 2435 ntBASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCN4BQ8IWT1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 DOC2GP-204ENST00000639052 2548 ntBASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.52■□□□□ 0.23
SCN4BQ8IWT1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 PCDHA1-201ENST00000378133 2726 ntBASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms