Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AC084364.1-201ENST00000551967 1556 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AC236430.1-201ENST00000402231 743 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 RPL5P21-201ENST00000404620 815 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 KRT18P64-201ENST00000434946 1219 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 RPL13P2-201ENST00000440687 659 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AC027369.6-201ENST00000525520 931 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AL158211.3-201ENST00000607385 239 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 TSPY26P-202ENST00000565928 3884 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AC103702.1-201ENST00000548801 2630 ntBASIC14.23□□□□□ -0.13
ATG4DQ86TL0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATG4DQ86TL0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 RNA5SP421-201ENST00000516864 134 ntBASIC14.22□□□□□ -0.13
ATG4DQ86TL0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 AC138761.1-201ENST00000584393 385 ntBASIC14.22□□□□□ -0.13
ATG4DQ86TL0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 AC074044.1-201ENST00000609673 707 ntBASIC14.22□□□□□ -0.13
ATG4DQ86TL0 AJ011932.1-201ENST00000621707 465 ntBASIC14.22□□□□□ -0.13
ATG4DQ86TL0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATG4DQ86TL0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms