Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 RPL13P2-201ENST00000440687 659 ntBASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TTTY23B-201ENST00000442790 549 ntBASIC14.2□□□□□ -0.14
RTL6Q6ICC9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 ACA64.2-201ENST00000459014 129 ntBASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AC106886.1-201ENST00000568660 600 ntBASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 MST1L-201ENST00000442552 2185 ntBASIC14.19□□□□□ -0.14
RTL6Q6ICC9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 AC006449.6-201ENST00000612330 2296 ntBASIC14.19□□□□□ -0.14
RTL6Q6ICC9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 TMEM14DP-201ENST00000422205 345 ntBASIC14.19□□□□□ -0.14
RTL6Q6ICC9 TARDBPP1-201ENST00000442013 1203 ntBASIC14.19□□□□□ -0.14
RTL6Q6ICC9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 KRT17P8-201ENST00000540749 863 ntBASIC14.19□□□□□ -0.14
RTL6Q6ICC9 AC092552.1-201ENST00000547243 906 ntBASIC14.19□□□□□ -0.14
RTL6Q6ICC9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTL6Q6ICC9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms