Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SUPT20HL2-201ENST00000486479 2409 ntBASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPAQ5VT25 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.14■■□□□ 1.29
CDC42BPAQ5VT25 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPAQ5VT25 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
CDC42BPAQ5VT25 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPAQ5VT25 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 CEP164P1-201ENST00000455142 418 ntBASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 AC005740.2-201ENST00000511085 419 ntBASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 Z98259.2-201ENST00000641583 609 ntBASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 SUPT4H1P2-201ENST00000501248 353 ntBASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 EID1-202ENST00000560490 584 ntTSL 3 BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 CU633904.3-201ENST00000624042 1029 ntBASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 AC100757.4-201ENST00000626934 759 ntBASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPAQ5VT25 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 NPPA-201ENST00000376476 728 ntTSL 3 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 SHC1P1-201ENST00000425230 1745 ntBASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 HLA-J-204ENST00000495278 958 ntBASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 AL161670.2-201ENST00000557650 1227 ntBASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
CDC42BPAQ5VT25 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 REXO1L5P-201ENST00000622260 2098 ntBASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 AC234782.1-201ENST00000451950 919 ntBASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 PRKXP1-201ENST00000561423 1122 ntBASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC23.11■■□□□ 1.29
CDC42BPAQ5VT25 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 FKBP4P6-201ENST00000457486 1332 ntBASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 AL008718.2-201ENST00000609206 1313 ntBASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms