Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AC254562.1-201ENST00000417586 456 ntBASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 SPCS2P4-201ENST00000436160 681 ntBASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AL138918.1-201ENST00000568306 659 ntBASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AC022145.2-201ENST00000598203 171 ntBASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ATPAF1Q5TC12 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 SBF1P1-201ENST00000444527 5631 ntBASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
ATPAF1Q5TC12 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 AL592309.1-201ENST00000443127 649 ntBASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 TIMM8BP1-201ENST00000452384 211 ntBASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 AC098859.1-201ENST00000502915 1238 ntBASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 IGHV3-62-201ENST00000520057 340 ntBASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms