Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 MROH4P-201ENST00000431302 1578 ntBASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AC092183.1-201ENST00000469884 875 ntBASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO1Q2MKA7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 MRPS18AP1-201ENST00000414458 589 ntBASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC008738.7-201ENST00000609744 511 ntBASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC004840.1-201ENST00000636359 365 ntBASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 BTBD7P1-201ENST00000447253 1453 ntBASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO1Q2MKA7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms