Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC27Q2M243 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC27Q2M243 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC27Q2M243 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC27Q2M243 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC27Q2M243 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC27Q2M243 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 AC092552.1-201ENST00000547243 906 ntBASIC20.3■□□□□ 0.84
CCDC27Q2M243 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 AC190387.1-201ENST00000551683 408 ntBASIC20.3■□□□□ 0.84
CCDC27Q2M243 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 AL049840.4-201ENST00000602422 811 ntBASIC20.3■□□□□ 0.84
CCDC27Q2M243 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC27Q2M243 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC27Q2M243 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 AC123567.1-201ENST00000548294 1261 ntBASIC20.29■□□□□ 0.84
CCDC27Q2M243 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 AC092364.2-202ENST00000597012 1073 ntBASIC20.29■□□□□ 0.84
CCDC27Q2M243 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 AC023157.3-201ENST00000619086 2088 ntBASIC20.29■□□□□ 0.84
CCDC27Q2M243 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC27Q2M243 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC27Q2M243 AC148477.4-201ENST00000613430 1793 ntBASIC20.29■□□□□ 0.84
CCDC27Q2M243 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 AC023024.2-201ENST00000623561 1993 ntBASIC20.28■□□□□ 0.84
CCDC27Q2M243 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 CRB3P1-201ENST00000449338 276 ntBASIC20.28■□□□□ 0.84
CCDC27Q2M243 RPL13AP25-201ENST00000484130 612 ntBASIC20.28■□□□□ 0.84
CCDC27Q2M243 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 TP53TG3HP-202ENST00000569755 579 ntBASIC20.28■□□□□ 0.84
CCDC27Q2M243 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.28■□□□□ 0.84
CCDC27Q2M243 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC27Q2M243 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC27Q2M243 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 CICP11-201ENST00000434745 2827 ntBASIC20.27■□□□□ 0.84
CCDC27Q2M243 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms