Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CD47Q08722 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.66□□□□□ -0.06
CD47Q08722 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.66□□□□□ -0.06
CD47Q08722 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 AC140479.7-201ENST00000636301 2332 ntBASIC14.66□□□□□ -0.06
CD47Q08722 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CD47Q08722 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CD47Q08722 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.65□□□□□ -0.06
CD47Q08722 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.65□□□□□ -0.06
CD47Q08722 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.65□□□□□ -0.06
CD47Q08722 AL009183.1-201ENST00000603760 355 ntBASIC14.65□□□□□ -0.06
CD47Q08722 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.65□□□□□ -0.06
CD47Q08722 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD47Q08722 AC148477.4-201ENST00000613430 1793 ntBASIC14.65□□□□□ -0.06
CD47Q08722 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CD47Q08722 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.64□□□□□ -0.07
CD47Q08722 FDX1P1-201ENST00000449115 551 ntBASIC14.64□□□□□ -0.07
CD47Q08722 KRT18P34-201ENST00000488218 1270 ntBASIC14.64□□□□□ -0.07
CD47Q08722 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms