Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DDR1Q08345 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.19■□□□□ 0.66
DDR1Q08345 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DDR1Q08345 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
DDR1Q08345 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.19■□□□□ 0.66
DDR1Q08345 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.19■□□□□ 0.66
DDR1Q08345 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.19■□□□□ 0.66
DDR1Q08345 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.19■□□□□ 0.66
DDR1Q08345 AC013355.1-201ENST00000562625 723 ntBASIC19.19■□□□□ 0.66
DDR1Q08345 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.19■□□□□ 0.66
DDR1Q08345 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 MIR3147-201ENST00000577811 66 ntBASIC19.19■□□□□ 0.66
DDR1Q08345 MIR4783-201ENST00000580343 82 ntBASIC19.19■□□□□ 0.66
DDR1Q08345 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 BNIP3P13-201ENST00000599968 566 ntBASIC19.19■□□□□ 0.66
DDR1Q08345 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.19■□□□□ 0.66
DDR1Q08345 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.19■□□□□ 0.66
DDR1Q08345 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
DDR1Q08345 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDR1Q08345 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDR1Q08345 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.18■□□□□ 0.66
DDR1Q08345 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
DDR1Q08345 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.18■□□□□ 0.66
DDR1Q08345 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DDR1Q08345 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.18■□□□□ 0.66
DDR1Q08345 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 IQSEC3P1-201ENST00000538799 536 ntBASIC19.18■□□□□ 0.66
DDR1Q08345 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DDR1Q08345 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.18■□□□□ 0.66
DDR1Q08345 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.18■□□□□ 0.66
DDR1Q08345 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.18■□□□□ 0.66
DDR1Q08345 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 AC004466.1-201ENST00000599515 1080 ntBASIC19.18■□□□□ 0.66
DDR1Q08345 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDR1Q08345 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDR1Q08345 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.18■□□□□ 0.66
DDR1Q08345 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DDR1Q08345 BCL2-203ENST00000589955 5011 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.17■□□□□ 0.66
DDR1Q08345 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 AL645937.2-201ENST00000396808 931 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.17■□□□□ 0.66
DDR1Q08345 AC011742.3-201ENST00000439053 820 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 AL596276.2-201ENST00000447525 331 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 AC104073.2-201ENST00000453737 312 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
DDR1Q08345 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 AL161670.2-201ENST00000557650 1227 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.17■□□□□ 0.66
DDR1Q08345 AL353726.2-201ENST00000623259 884 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 AC100757.4-201ENST00000626934 759 ntBASIC19.17■□□□□ 0.66
DDR1Q08345 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.17■□□□□ 0.66
DDR1Q08345 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDR1Q08345 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.17■□□□□ 0.66
DDR1Q08345 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms