Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.93□□□□□ -0.18
NKX6-1P78426 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.93□□□□□ -0.18
NKX6-1P78426 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.93□□□□□ -0.18
NKX6-1P78426 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.93□□□□□ -0.18
NKX6-1P78426 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.93□□□□□ -0.18
NKX6-1P78426 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX6-1P78426 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NKX6-1P78426 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NKX6-1P78426 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-1P78426 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX6-1P78426 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 SPDYE19P-201ENST00000338590 713 ntBASIC13.92□□□□□ -0.18
NKX6-1P78426 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AC112492.5-201ENST00000421897 457 ntBASIC13.92□□□□□ -0.18
NKX6-1P78426 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AC245100.3-201ENST00000441281 285 ntBASIC13.92□□□□□ -0.18
NKX6-1P78426 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AL139010.1-201ENST00000454878 894 ntBASIC13.92□□□□□ -0.18
NKX6-1P78426 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AL079307.3-201ENST00000556114 283 ntBASIC13.92□□□□□ -0.18
NKX6-1P78426 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AC008494.3-201ENST00000606615 944 ntBASIC13.92□□□□□ -0.18
NKX6-1P78426 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX6-1P78426 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
NKX6-1P78426 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX6-1P78426 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX6-1P78426 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-1P78426 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-1P78426 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-1P78426 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-1P78426 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NKX6-1P78426 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NKX6-1P78426 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms