Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 AC005912.2-201ENST00000619492 2400 ntBASIC14.83□□□□□ -0.04
RPS3AP61247 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 LINC01101-201ENST00000622953 1884 ntBASIC14.83□□□□□ -0.04
RPS3AP61247 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS3AP61247 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS3AP61247 METTL21AP1-201ENST00000438852 635 ntBASIC14.83□□□□□ -0.04
RPS3AP61247 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 PRYP6-201ENST00000514804 343 ntBASIC14.83□□□□□ -0.04
RPS3AP61247 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS3AP61247 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RPS3AP61247 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.83□□□□□ -0.04
RPS3AP61247 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RPS3AP61247 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.83□□□□□ -0.04
RPS3AP61247 AC136621.1-201ENST00000624017 2304 ntBASIC14.83□□□□□ -0.04
RPS3AP61247 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RPS3AP61247 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS3AP61247 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS3AP61247 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RPS3AP61247 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 AC069335.1-201ENST00000489972 472 ntBASIC14.82□□□□□ -0.04
RPS3AP61247 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 AC025678.2-201ENST00000562061 970 ntBASIC14.82□□□□□ -0.04
RPS3AP61247 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 AC009093.7-201ENST00000623853 1223 ntBASIC14.82□□□□□ -0.04
RPS3AP61247 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 AL512652.2-201ENST00000625156 1716 ntBASIC14.82□□□□□ -0.04
RPS3AP61247 GPAA1P2-202ENST00000606848 1787 ntBASIC14.82□□□□□ -0.04
RPS3AP61247 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS3AP61247 SSR4P1-203ENST00000599569 2260 ntBASIC14.82□□□□□ -0.04
RPS3AP61247 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS3AP61247 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS3AP61247 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS3AP61247 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RPS3AP61247 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms