Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
SUMO3P55854 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SUMO3P55854 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.17□□□□□ -0.14
SUMO3P55854 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 DFFBP1-201ENST00000433250 979 ntBASIC14.17□□□□□ -0.14
SUMO3P55854 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.17□□□□□ -0.14
SUMO3P55854 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 TSPY16P-201ENST00000449843 468 ntBASIC14.17□□□□□ -0.14
SUMO3P55854 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.17□□□□□ -0.14
SUMO3P55854 AL589987.1-201ENST00000453380 819 ntBASIC14.17□□□□□ -0.14
SUMO3P55854 UGT1A2P-201ENST00000454886 866 ntBASIC14.17□□□□□ -0.14
SUMO3P55854 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SUMO3P55854 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 AL391825.1-201ENST00000457671 1364 ntBASIC14.17□□□□□ -0.14
SUMO3P55854 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SUMO3P55854 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.17□□□□□ -0.14
SUMO3P55854 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
SUMO3P55854 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
SUMO3P55854 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.16□□□□□ -0.14
SUMO3P55854 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.16□□□□□ -0.14
SUMO3P55854 RPL13AP25-201ENST00000484130 612 ntBASIC14.16□□□□□ -0.14
SUMO3P55854 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.16□□□□□ -0.14
SUMO3P55854 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.16□□□□□ -0.14
SUMO3P55854 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.16□□□□□ -0.14
SUMO3P55854 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SUMO3P55854 AC025181.2-201ENST00000606994 802 ntBASIC14.16□□□□□ -0.14
SUMO3P55854 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 KRT8P44-201ENST00000441609 1350 ntBASIC14.16□□□□□ -0.14
SUMO3P55854 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SUMO3P55854 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SUMO3P55854 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SUMO3P55854 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SUMO3P55854 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SUMO3P55854 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SUMO3P55854 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms