Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC25A1P53007 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SLC25A1P53007 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC25A1P53007 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
SLC25A1P53007 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 KRT18P32-201ENST00000424695 1287 ntBASIC13.96□□□□□ -0.17
SLC25A1P53007 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SLC25A1P53007 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC25A1P53007 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.96□□□□□ -0.17
SLC25A1P53007 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC25A1P53007 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC25A1P53007 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SLC25A1P53007 AL133215.2-201ENST00000609242 977 ntBASIC13.96□□□□□ -0.17
SLC25A1P53007 AL513210.1-201ENST00000629608 234 ntBASIC13.96□□□□□ -0.17
SLC25A1P53007 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SLC25A1P53007 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC25A1P53007 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SLC25A1P53007 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC25A1P53007 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLC25A1P53007 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLC25A1P53007 LINC00528-201ENST00000600723 2160 ntBASIC13.96□□□□□ -0.18
SLC25A1P53007 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC25A1P53007 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.96□□□□□ -0.18
SLC25A1P53007 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC25A1P53007 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC25A1P53007 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SLC25A1P53007 AL035456.1-201ENST00000456064 1369 ntBASIC13.96□□□□□ -0.18
SLC25A1P53007 KRT8P12-202ENST00000472924 1397 ntBASIC13.96□□□□□ -0.18
SLC25A1P53007 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC25A1P53007 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLC25A1P53007 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC25A1P53007 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 FAM8A3P-201ENST00000427218 844 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 FAM58DP-201ENST00000428076 619 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC25A1P53007 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC25A1P53007 CEND1P1-201ENST00000451006 455 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 POLD2P1-201ENST00000511220 997 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 AC005829.1-201ENST00000570002 483 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
SLC25A1P53007 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC25A1P53007 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SLC25A1P53007 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SLC25A1P53007 AC007967.4-201ENST00000614700 386 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLC25A1P53007 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
SLC25A1P53007 AL390755.1-201ENST00000623716 2027 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms