Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.24■□□□□ 0.35
CPT1AP50416 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPT1AP50416 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPT1AP50416 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPT1AP50416 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CPT1AP50416 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 AC015818.8-201ENST00000587907 1519 ntBASIC17.23■□□□□ 0.35
CPT1AP50416 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CPT1AP50416 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.23■□□□□ 0.35
CPT1AP50416 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CPT1AP50416 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 AL645937.2-201ENST00000396808 931 ntBASIC17.23■□□□□ 0.35
CPT1AP50416 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.23■□□□□ 0.35
CPT1AP50416 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.23■□□□□ 0.35
CPT1AP50416 AC005695.3-201ENST00000614522 232 ntBASIC17.23■□□□□ 0.35
CPT1AP50416 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.23■□□□□ 0.35
CPT1AP50416 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CPT1AP50416 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CPT1AP50416 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CPT1AP50416 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPT1AP50416 PCDHA12-202ENST00000613593 2588 ntBASIC17.23■□□□□ 0.35
CPT1AP50416 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CPT1AP50416 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
CPT1AP50416 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CPT1AP50416 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.22■□□□□ 0.35
CPT1AP50416 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CPT1AP50416 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.22■□□□□ 0.35
CPT1AP50416 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.22■□□□□ 0.35
CPT1AP50416 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CPT1AP50416 AC004066.1-201ENST00000502488 802 ntBASIC17.22■□□□□ 0.35
CPT1AP50416 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.22■□□□□ 0.35
CPT1AP50416 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
CPT1AP50416 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.22■□□□□ 0.35
CPT1AP50416 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.22■□□□□ 0.35
CPT1AP50416 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 AC244452.3-201ENST00000636814 210 ntBASIC17.22■□□□□ 0.35
CPT1AP50416 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 AC148477.4-201ENST00000613430 1793 ntBASIC17.22■□□□□ 0.35
CPT1AP50416 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
CPT1AP50416 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPT1AP50416 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CPT1AP50416 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CPT1AP50416 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.21■□□□□ 0.35
CPT1AP50416 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CPT1AP50416 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.21■□□□□ 0.35
CPT1AP50416 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms