Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
KRT6CP48668 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT6CP48668 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6CP48668 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6CP48668 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT6CP48668 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6CP48668 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6CP48668 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KRT6CP48668 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6CP48668 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6CP48668 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT6CP48668 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
KRT6CP48668 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KRT6CP48668 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT6CP48668 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6CP48668 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.28■□□□□ 0.04
KRT6CP48668 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT6CP48668 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.28■□□□□ 0.04
KRT6CP48668 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 AC018529.1-201ENST00000613063 361 ntBASIC15.28■□□□□ 0.04
KRT6CP48668 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.28■□□□□ 0.04
KRT6CP48668 AL513210.1-201ENST00000629608 234 ntBASIC15.28■□□□□ 0.04
KRT6CP48668 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6CP48668 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT6CP48668 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT6CP48668 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6CP48668 OR2I1P-210ENST00000642037 4691 ntBASIC15.28■□□□□ 0.04
KRT6CP48668 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6CP48668 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 C18orf15-201ENST00000623680 2534 ntBASIC15.27■□□□□ 0.04
KRT6CP48668 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 AC112693.3-201ENST00000624819 1983 ntBASIC15.27■□□□□ 0.04
KRT6CP48668 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.27■□□□□ 0.04
KRT6CP48668 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
KRT6CP48668 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT6CP48668 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.27■□□□□ 0.04
KRT6CP48668 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6CP48668 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT6CP48668 HNRNPUP1-201ENST00000554987 333 ntBASIC15.27■□□□□ 0.04
KRT6CP48668 MIR3687-2-201ENST00000577708 61 ntBASIC15.27■□□□□ 0.04
KRT6CP48668 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6CP48668 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.27■□□□□ 0.04
KRT6CP48668 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT6CP48668 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6CP48668 MIR3687-1-201ENST00000614492 61 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms