Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ATRXP46100 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ATRXP46100 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ATRXP46100 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.16□□□□□ -0.14
ATRXP46100 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.16□□□□□ -0.14
ATRXP46100 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.16□□□□□ -0.14
ATRXP46100 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.16□□□□□ -0.14
ATRXP46100 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.16□□□□□ -0.14
ATRXP46100 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.16□□□□□ -0.14
ATRXP46100 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 GGT3P-204ENST00000453783 1664 ntBASIC14.15□□□□□ -0.14
ATRXP46100 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ATRXP46100 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 AP001582.1-201ENST00000525856 295 ntBASIC14.15□□□□□ -0.14
ATRXP46100 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.15□□□□□ -0.14
ATRXP46100 LINC00431-202ENST00000636375 159 ntBASIC14.15□□□□□ -0.14
ATRXP46100 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.15□□□□□ -0.14
ATRXP46100 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 CFL1P6-201ENST00000400899 494 ntBASIC14.15□□□□□ -0.14
ATRXP46100 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATRXP46100 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 AC130709.1-201ENST00000484779 1212 ntBASIC14.15□□□□□ -0.14
ATRXP46100 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.15□□□□□ -0.14
ATRXP46100 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.15□□□□□ -0.14
ATRXP46100 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 MIR5196-201ENST00000578146 115 ntBASIC14.15□□□□□ -0.14
ATRXP46100 PEBP1P2-201ENST00000603980 558 ntBASIC14.15□□□□□ -0.14
ATRXP46100 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ATRXP46100 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.15□□□□□ -0.14
ATRXP46100 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ATRXP46100 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 AL137077.2-201ENST00000635124 1608 ntBASIC14.14□□□□□ -0.15
ATRXP46100 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ATRXP46100 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.14□□□□□ -0.15
ATRXP46100 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ATRXP46100 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.14□□□□□ -0.15
ATRXP46100 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.14□□□□□ -0.15
ATRXP46100 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.14□□□□□ -0.15
ATRXP46100 AC073413.1-201ENST00000603927 732 ntBASIC14.14□□□□□ -0.15
ATRXP46100 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
ATRXP46100 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ATRXP46100 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATRXP46100 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 AC004899.1-201ENST00000424687 1714 ntBASIC14.14□□□□□ -0.15
ATRXP46100 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.14□□□□□ -0.15
ATRXP46100 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ATRXP46100 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.14□□□□□ -0.15
ATRXP46100 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms