Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
GDF5P43026 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GDF5P43026 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.3■□□□□ 0.04
GDF5P43026 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.3■□□□□ 0.04
GDF5P43026 AC074338.1-201ENST00000416825 156 ntBASIC15.3■□□□□ 0.04
GDF5P43026 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.3■□□□□ 0.04
GDF5P43026 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 CNN2P2-201ENST00000443536 909 ntBASIC15.3■□□□□ 0.04
GDF5P43026 CNN2P3-201ENST00000450201 906 ntBASIC15.3■□□□□ 0.04
GDF5P43026 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.3■□□□□ 0.04
GDF5P43026 AC125807.1-201ENST00000483097 614 ntBASIC15.3■□□□□ 0.04
GDF5P43026 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GDF5P43026 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GDF5P43026 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.3■□□□□ 0.04
GDF5P43026 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.3■□□□□ 0.04
GDF5P43026 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.3■□□□□ 0.04
GDF5P43026 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.3■□□□□ 0.04
GDF5P43026 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.3■□□□□ 0.04
GDF5P43026 AL136317.3-201ENST00000618497 906 ntBASIC15.3■□□□□ 0.04
GDF5P43026 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.3■□□□□ 0.04
GDF5P43026 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.3■□□□□ 0.04
GDF5P43026 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
GDF5P43026 AL033527.5-202ENST00000641632 1098 ntBASIC15.3■□□□□ 0.04
GDF5P43026 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF5P43026 MST1L-201ENST00000442552 2185 ntBASIC15.29■□□□□ 0.04
GDF5P43026 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF5P43026 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF5P43026 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
GDF5P43026 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF5P43026 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.29■□□□□ 0.04
GDF5P43026 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 FO538757.1-201ENST00000623083 1397 ntBASIC15.29■□□□□ 0.04
GDF5P43026 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 TEX28P1-201ENST00000613479 1221 ntBASIC15.29■□□□□ 0.04
GDF5P43026 TEX28P2-201ENST00000617764 1221 ntBASIC15.29■□□□□ 0.04
GDF5P43026 MIR6069-201ENST00000620069 79 ntBASIC15.29■□□□□ 0.04
GDF5P43026 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF5P43026 AC067930.6-201ENST00000623257 4947 ntBASIC15.29■□□□□ 0.04
GDF5P43026 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF5P43026 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 LINC02228-204ENST00000642115 2962 ntBASIC15.29■□□□□ 0.04
GDF5P43026 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF5P43026 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF5P43026 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF5P43026 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF5P43026 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF5P43026 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF5P43026 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
GDF5P43026 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.28■□□□□ 0.04
GDF5P43026 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF5P43026 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 FLJ16779-201ENST00000612722 7638 ntBASIC15.28■□□□□ 0.04
GDF5P43026 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GDF5P43026 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
GDF5P43026 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GDF5P43026 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF5P43026 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GDF5P43026 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms