Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.02■□□□□ -0
KRT20P35900 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
KRT20P35900 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
KRT20P35900 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.02■□□□□ -0
KRT20P35900 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
KRT20P35900 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.02■□□□□ -0
KRT20P35900 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.02■□□□□ -0
KRT20P35900 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.02■□□□□ -0
KRT20P35900 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
KRT20P35900 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
KRT20P35900 FAM220BP-201ENST00000377689 816 ntBASIC15.02■□□□□ -0
KRT20P35900 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
KRT20P35900 RBPMS2P1-201ENST00000437762 623 ntBASIC15.02■□□□□ -0
KRT20P35900 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.02■□□□□ -0
KRT20P35900 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT20P35900 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
KRT20P35900 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.02■□□□□ -0
KRT20P35900 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.02■□□□□ -0
KRT20P35900 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.02■□□□□ -0
KRT20P35900 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.02■□□□□ -0
KRT20P35900 AC139530.3-201ENST00000620344 690 ntBASIC15.02■□□□□ -0
KRT20P35900 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.02■□□□□ -0
KRT20P35900 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.02□□□□□ -0.01
KRT20P35900 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 AL109954.1-202ENST00000564051 2148 ntBASIC15.02□□□□□ -0.01
KRT20P35900 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.02□□□□□ -0.01
KRT20P35900 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
KRT20P35900 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.02□□□□□ -0.01
KRT20P35900 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
KRT20P35900 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT20P35900 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
KRT20P35900 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.02□□□□□ -0.01
KRT20P35900 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.02□□□□□ -0.01
KRT20P35900 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.01□□□□□ -0.01
KRT20P35900 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.01□□□□□ -0.01
KRT20P35900 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
KRT20P35900 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KRT20P35900 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KRT20P35900 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KRT20P35900 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.01□□□□□ -0.01
KRT20P35900 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT20P35900 ALG1L8P-201ENST00000533887 760 ntBASIC15.01□□□□□ -0.01
KRT20P35900 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.01□□□□□ -0.01
KRT20P35900 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT20P35900 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.01□□□□□ -0.01
KRT20P35900 MIR4321-201ENST00000592276 80 ntBASIC15.01□□□□□ -0.01
KRT20P35900 GPALPP1-207ENST00000611650 899 ntBASIC15.01□□□□□ -0.01
KRT20P35900 AC009093.7-201ENST00000623853 1223 ntBASIC15.01□□□□□ -0.01
KRT20P35900 AC084121.4-201ENST00000641598 221 ntBASIC15.01□□□□□ -0.01
KRT20P35900 AF228730.8-201ENST00000642140 221 ntBASIC15.01□□□□□ -0.01
KRT20P35900 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
KRT20P35900 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.01□□□□□ -0.01
KRT20P35900 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT20P35900 AC138969.2-201ENST00000532739 9932 ntBASIC15.01□□□□□ -0.01
KRT20P35900 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.01□□□□□ -0.01
KRT20P35900 AP003680.1-201ENST00000598970 3660 ntBASIC15.01□□□□□ -0.01
KRT20P35900 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT20P35900 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15□□□□□ -0.01
KRT20P35900 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15□□□□□ -0.01
KRT20P35900 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT20P35900 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15□□□□□ -0.01
KRT20P35900 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
KRT20P35900 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
KRT20P35900 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15□□□□□ -0.01
KRT20P35900 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT20P35900 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms