Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLCN1P35523 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLCN1P35523 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN1P35523 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLCN1P35523 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN1P35523 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN1P35523 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.94■□□□□ 0.46
CLCN1P35523 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 KRT8P39-201ENST00000396270 1433 ntBASIC17.93■□□□□ 0.46
CLCN1P35523 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 MRPL20P1-201ENST00000400819 433 ntBASIC17.93■□□□□ 0.46
CLCN1P35523 AC098831.1-202ENST00000438821 336 ntBASIC17.93■□□□□ 0.46
CLCN1P35523 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 CYP2A7P1-201ENST00000595391 815 ntBASIC17.93■□□□□ 0.46
CLCN1P35523 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN1P35523 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 HLA-A-201ENST00000376802 1334 ntBASIC17.93■□□□□ 0.46
CLCN1P35523 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN1P35523 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN1P35523 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN1P35523 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
CLCN1P35523 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN1P35523 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLCN1P35523 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN1P35523 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN1P35523 TPM4P1-201ENST00000436100 807 ntBASIC17.92■□□□□ 0.46
CLCN1P35523 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CLCN1P35523 IGHV3-22-201ENST00000520721 359 ntBASIC17.92■□□□□ 0.46
CLCN1P35523 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.92■□□□□ 0.46
CLCN1P35523 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CLCN1P35523 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN1P35523 AP001005.1-201ENST00000571755 1248 ntBASIC17.92■□□□□ 0.46
CLCN1P35523 AC005412.3-201ENST00000580309 715 ntBASIC17.92■□□□□ 0.46
CLCN1P35523 AC010654.1-201ENST00000615722 808 ntBASIC17.92■□□□□ 0.46
CLCN1P35523 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN1P35523 NUTM2HP-201ENST00000442076 2498 ntBASIC17.92■□□□□ 0.46
CLCN1P35523 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms