Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.35□□□□□ -0.11
CD53P19397 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.34□□□□□ -0.11
CD53P19397 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 AC067930.6-201ENST00000623257 4947 ntBASIC14.34□□□□□ -0.11
CD53P19397 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CD53P19397 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CD53P19397 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CD53P19397 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
CD53P19397 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD53P19397 AC008267.7-201ENST00000624570 1194 ntBASIC14.34□□□□□ -0.11
CD53P19397 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD53P19397 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.34□□□□□ -0.11
CD53P19397 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.34□□□□□ -0.11
CD53P19397 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.34□□□□□ -0.11
CD53P19397 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.34□□□□□ -0.11
CD53P19397 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD53P19397 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD53P19397 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.33□□□□□ -0.11
CD53P19397 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.33□□□□□ -0.11
CD53P19397 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CD53P19397 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD53P19397 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD53P19397 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD53P19397 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.11
CD53P19397 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.33□□□□□ -0.11
CD53P19397 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.33□□□□□ -0.12
CD53P19397 AC241585.1-201ENST00000433527 519 ntBASIC14.33□□□□□ -0.12
CD53P19397 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 SERBP1P5-201ENST00000510079 1181 ntBASIC14.33□□□□□ -0.12
CD53P19397 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.33□□□□□ -0.12
CD53P19397 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 CR383656.12-201ENST00000549567 513 ntBASIC14.33□□□□□ -0.12
CD53P19397 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.33□□□□□ -0.12
CD53P19397 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 AP000842.3-202ENST00000569238 1080 ntBASIC14.33□□□□□ -0.12
CD53P19397 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.33□□□□□ -0.12
CD53P19397 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CD53P19397 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD53P19397 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CD53P19397 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD53P19397 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD53P19397 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms