Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMPD1P17405 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMPD1P17405 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SMPD1P17405 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.27■□□□□ 0.36
SMPD1P17405 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.27■□□□□ 0.36
SMPD1P17405 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMPD1P17405 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.27■□□□□ 0.36
SMPD1P17405 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.27■□□□□ 0.36
SMPD1P17405 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.27■□□□□ 0.36
SMPD1P17405 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMPD1P17405 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.27■□□□□ 0.36
SMPD1P17405 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SMPD1P17405 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.27■□□□□ 0.35
SMPD1P17405 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMPD1P17405 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SMPD1P17405 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMPD1P17405 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 AC018735.1-201ENST00000437208 1502 ntBASIC17.26■□□□□ 0.35
SMPD1P17405 LRRC59-203ENST00000576448 1531 ntBASIC17.26■□□□□ 0.35
SMPD1P17405 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 AL158070.2-201ENST00000623713 1621 ntBASIC17.26■□□□□ 0.35
SMPD1P17405 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.26■□□□□ 0.35
SMPD1P17405 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.26■□□□□ 0.35
SMPD1P17405 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.26■□□□□ 0.35
SMPD1P17405 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.26■□□□□ 0.35
SMPD1P17405 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 ENPP7P14-201ENST00000621765 1040 ntBASIC17.26■□□□□ 0.35
SMPD1P17405 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMPD1P17405 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SMPD1P17405 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMPD1P17405 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMPD1P17405 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.26■□□□□ 0.35
SMPD1P17405 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.25■□□□□ 0.35
SMPD1P17405 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 AC084364.1-201ENST00000551967 1556 ntBASIC17.25■□□□□ 0.35
SMPD1P17405 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.25■□□□□ 0.35
SMPD1P17405 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.25■□□□□ 0.35
SMPD1P17405 AC004898.1-201ENST00000451057 766 ntBASIC17.25■□□□□ 0.35
SMPD1P17405 AC004066.1-201ENST00000502488 802 ntBASIC17.25■□□□□ 0.35
SMPD1P17405 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SMPD1P17405 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMPD1P17405 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMPD1P17405 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.25■□□□□ 0.35
SMPD1P17405 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.25■□□□□ 0.35
SMPD1P17405 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.25■□□□□ 0.35
SMPD1P17405 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMPD1P17405 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.25■□□□□ 0.35
SMPD1P17405 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms