Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.22■□□□□ 0.19
GJA1P17302 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.22■□□□□ 0.19
GJA1P17302 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
GJA1P17302 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.22■□□□□ 0.19
GJA1P17302 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GJA1P17302 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.22■□□□□ 0.19
GJA1P17302 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.21■□□□□ 0.19
GJA1P17302 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GJA1P17302 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
GJA1P17302 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.21■□□□□ 0.19
GJA1P17302 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
GJA1P17302 ACKR1-201ENST00000368121 1240 ntBASIC16.21■□□□□ 0.19
GJA1P17302 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
GJA1P17302 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.21■□□□□ 0.19
GJA1P17302 YBX1P6-201ENST00000442962 1002 ntBASIC16.21■□□□□ 0.19
GJA1P17302 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.21■□□□□ 0.19
GJA1P17302 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.21■□□□□ 0.19
GJA1P17302 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GJA1P17302 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.21■□□□□ 0.19
GJA1P17302 MIR6787-201ENST00000616675 61 ntBASIC16.21■□□□□ 0.19
GJA1P17302 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.21■□□□□ 0.19
GJA1P17302 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.21■□□□□ 0.19
GJA1P17302 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GJA1P17302 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
GJA1P17302 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GJA1P17302 AL138799.1-201ENST00000448213 1675 ntBASIC16.21■□□□□ 0.18
GJA1P17302 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
GJA1P17302 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GJA1P17302 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GJA1P17302 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
GJA1P17302 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 FAM197Y7-201ENST00000432892 766 ntBASIC16.2■□□□□ 0.18
GJA1P17302 GAPDHP40-201ENST00000505218 1006 ntBASIC16.2■□□□□ 0.18
GJA1P17302 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.2■□□□□ 0.18
GJA1P17302 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.2■□□□□ 0.18
GJA1P17302 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.2■□□□□ 0.18
GJA1P17302 AC145423.3-201ENST00000615987 467 ntBASIC16.2■□□□□ 0.18
GJA1P17302 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GJA1P17302 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 KRT8P44-201ENST00000441609 1350 ntBASIC16.2■□□□□ 0.18
GJA1P17302 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GJA1P17302 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GJA1P17302 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GJA1P17302 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms