Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC036164.1-201ENST00000570544 333 ntBASIC14.24□□□□□ -0.13
FREM3P0C091 AC097359.3-201ENST00000603982 1210 ntBASIC14.24□□□□□ -0.13
FREM3P0C091 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 TSPY26P-202ENST00000565928 3884 ntBASIC14.24□□□□□ -0.13
FREM3P0C091 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 MYCLP2-201ENST00000449268 967 ntBASIC14.23□□□□□ -0.13
FREM3P0C091 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.23□□□□□ -0.13
FREM3P0C091 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.23□□□□□ -0.13
FREM3P0C091 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
FREM3P0C091 SLED1-202ENST00000512051 380 ntBASIC14.23□□□□□ -0.13
FREM3P0C091 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FREM3P0C091 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
FREM3P0C091 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 AC063926.2-201ENST00000623766 1308 ntBASIC14.22□□□□□ -0.13
FREM3P0C091 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
FREM3P0C091 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.22□□□□□ -0.13
FREM3P0C091 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 AL049840.4-201ENST00000602422 811 ntBASIC14.22□□□□□ -0.13
FREM3P0C091 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.22□□□□□ -0.13
FREM3P0C091 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.22□□□□□ -0.13
FREM3P0C091 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.22□□□□□ -0.13
FREM3P0C091 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
FREM3P0C091 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
FREM3P0C091 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms