Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 AC087481.3-201ENST00000602886 1894 ntBASIC15.52■□□□□ 0.08
CAPN1P07384 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CAPN1P07384 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.52■□□□□ 0.08
CAPN1P07384 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.52■□□□□ 0.08
CAPN1P07384 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.52■□□□□ 0.08
CAPN1P07384 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.52■□□□□ 0.08
CAPN1P07384 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 AC018892.3-201ENST00000623986 2499 ntBASIC15.52■□□□□ 0.08
CAPN1P07384 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.52■□□□□ 0.08
CAPN1P07384 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CAPN1P07384 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.52■□□□□ 0.08
CAPN1P07384 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.52■□□□□ 0.08
CAPN1P07384 TSPY16P-201ENST00000449843 468 ntBASIC15.52■□□□□ 0.08
CAPN1P07384 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.52■□□□□ 0.08
CAPN1P07384 IGHV3-42-201ENST00000520410 361 ntBASIC15.52■□□□□ 0.08
CAPN1P07384 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN1P07384 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN1P07384 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.52■□□□□ 0.08
CAPN1P07384 AC007967.4-201ENST00000614700 386 ntBASIC15.52■□□□□ 0.08
CAPN1P07384 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN1P07384 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 BNIP3P1-202ENST00000550043 1585 ntBASIC15.52■□□□□ 0.07
CAPN1P07384 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CAPN1P07384 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.52■□□□□ 0.07
CAPN1P07384 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CAPN1P07384 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CAPN1P07384 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CAPN1P07384 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN1P07384 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CAPN1P07384 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN1P07384 FAM220BP-201ENST00000377689 816 ntBASIC15.51■□□□□ 0.07
CAPN1P07384 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN1P07384 AC002472.2-201ENST00000442739 958 ntBASIC15.51■□□□□ 0.07
CAPN1P07384 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.51■□□□□ 0.07
CAPN1P07384 RNA5SP410-201ENST00000516285 106 ntBASIC15.51■□□□□ 0.07
CAPN1P07384 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.51■□□□□ 0.07
CAPN1P07384 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CAPN1P07384 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN1P07384 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CAPN1P07384 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.51■□□□□ 0.07
CAPN1P07384 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 AC067930.6-201ENST00000623257 4947 ntBASIC15.51■□□□□ 0.07
CAPN1P07384 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CAPN1P07384 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms