Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.09□□□□□ -0.31
CTSDP07339 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CTSDP07339 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 CICP14-201ENST00000629111 2732 ntBASIC13.09□□□□□ -0.31
CTSDP07339 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSDP07339 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSDP07339 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CTSDP07339 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CTSDP07339 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.08□□□□□ -0.31
CTSDP07339 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CTSDP07339 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
CTSDP07339 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CTSDP07339 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.08□□□□□ -0.32
CTSDP07339 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CTSDP07339 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CTSDP07339 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 RPL5P21-201ENST00000404620 815 ntBASIC13.08□□□□□ -0.32
CTSDP07339 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.08□□□□□ -0.32
CTSDP07339 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.08□□□□□ -0.32
CTSDP07339 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.08□□□□□ -0.32
CTSDP07339 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 RN7SL510P-201ENST00000581311 263 ntBASIC13.08□□□□□ -0.32
CTSDP07339 AC061975.2-201ENST00000581722 295 ntBASIC13.08□□□□□ -0.32
CTSDP07339 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.08□□□□□ -0.32
CTSDP07339 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CTSDP07339 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSDP07339 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSDP07339 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CTSDP07339 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms