Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGN1P05114 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGN1P05114 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMGN1P05114 AP002472.1-201ENST00000577490 586 ntBASIC14.29□□□□□ -0.12
HMGN1P05114 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGN1P05114 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGN1P05114 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGN1P05114 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 KRT8P37-201ENST00000451609 1420 ntBASIC14.29□□□□□ -0.12
HMGN1P05114 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGN1P05114 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HMGN1P05114 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HMGN1P05114 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HMGN1P05114 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HMGN1P05114 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGN1P05114 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGN1P05114 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGN1P05114 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HMGN1P05114 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMGN1P05114 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGN1P05114 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HMGN1P05114 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGN1P05114 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGN1P05114 AL139010.1-201ENST00000454878 894 ntBASIC14.28□□□□□ -0.12
HMGN1P05114 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGN1P05114 RNA5SP410-201ENST00000516285 106 ntBASIC14.28□□□□□ -0.12
HMGN1P05114 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGN1P05114 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGN1P05114 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGN1P05114 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGN1P05114 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGN1P05114 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGN1P05114 AC018845.2-201ENST00000568326 409 ntBASIC14.28□□□□□ -0.12
HMGN1P05114 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.28□□□□□ -0.12
HMGN1P05114 RN7SL510P-201ENST00000581311 263 ntBASIC14.28□□□□□ -0.12
HMGN1P05114 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.28□□□□□ -0.12
HMGN1P05114 AC064836.3-201ENST00000607928 673 ntBASIC14.28□□□□□ -0.12
HMGN1P05114 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HMGN1P05114 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGN1P05114 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN1P05114 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGN1P05114 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGN1P05114 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN1P05114 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGN1P05114 AC023024.2-201ENST00000623561 1993 ntBASIC14.27□□□□□ -0.12
HMGN1P05114 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN1P05114 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
HMGN1P05114 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN1P05114 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN1P05114 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGN1P05114 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN1P05114 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN1P05114 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN1P05114 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN1P05114 AL662844.1-201ENST00000546340 181 ntBASIC14.27□□□□□ -0.13
HMGN1P05114 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGN1P05114 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMGN1P05114 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN1P05114 AC104692.2-201ENST00000603054 253 ntBASIC14.27□□□□□ -0.13
HMGN1P05114 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGN1P05114 AC026979.3-201ENST00000607315 403 ntBASIC14.27□□□□□ -0.13
HMGN1P05114 AC008267.7-201ENST00000624570 1194 ntBASIC14.27□□□□□ -0.13
HMGN1P05114 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGN1P05114 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN1P05114 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms