Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.77■□□□□ 0.6
CHGBP05060 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.77■□□□□ 0.6
CHGBP05060 AP002414.2-201ENST00000591780 3365 ntBASIC18.77■□□□□ 0.6
CHGBP05060 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.77■□□□□ 0.6
CHGBP05060 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.77■□□□□ 0.6
CHGBP05060 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 AC087499.6-201ENST00000411576 835 ntBASIC18.77■□□□□ 0.6
CHGBP05060 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.77■□□□□ 0.6
CHGBP05060 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.77■□□□□ 0.6
CHGBP05060 INE1-201ENST00000456273 945 ntBASIC18.77■□□□□ 0.6
CHGBP05060 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.77■□□□□ 0.6
CHGBP05060 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.77■□□□□ 0.6
CHGBP05060 AC005225.4-201ENST00000557330 545 ntBASIC18.77■□□□□ 0.6
CHGBP05060 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.77■□□□□ 0.6
CHGBP05060 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.77■□□□□ 0.6
CHGBP05060 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHGBP05060 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHGBP05060 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 MSTO2P-201ENST00000314835 1709 ntBASIC18.77■□□□□ 0.59
CHGBP05060 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
CHGBP05060 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHGBP05060 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHGBP05060 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 AC092384.3-202ENST00000564646 2873 ntBASIC18.76■□□□□ 0.59
CHGBP05060 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 DRD5P1-201ENST00000456605 1438 ntBASIC18.76■□□□□ 0.59
CHGBP05060 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHGBP05060 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 AL133267.1-201ENST00000398220 340 ntBASIC18.76■□□□□ 0.59
CHGBP05060 MEP1AP4-201ENST00000423244 1087 ntBASIC18.76■□□□□ 0.59
CHGBP05060 NME2P1-201ENST00000426182 414 ntBASIC18.76■□□□□ 0.59
CHGBP05060 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.76■□□□□ 0.59
CHGBP05060 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.76■□□□□ 0.59
CHGBP05060 RRP7BP-205ENST00000566851 833 ntBASIC18.76■□□□□ 0.59
CHGBP05060 AC124283.3-201ENST00000570869 594 ntBASIC18.76■□□□□ 0.59
CHGBP05060 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.76■□□□□ 0.59
CHGBP05060 TMEM261P1-201ENST00000604899 340 ntBASIC18.76■□□□□ 0.59
CHGBP05060 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CHGBP05060 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHGBP05060 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.76■□□□□ 0.59
CHGBP05060 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.76■□□□□ 0.59
CHGBP05060 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHGBP05060 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.75■□□□□ 0.59
CHGBP05060 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.75■□□□□ 0.59
CHGBP05060 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHGBP05060 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.75■□□□□ 0.59
CHGBP05060 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.75■□□□□ 0.59
CHGBP05060 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.75■□□□□ 0.59
CHGBP05060 RN7SL837P-201ENST00000463010 287 ntBASIC18.75■□□□□ 0.59
CHGBP05060 GAPDHP40-201ENST00000505218 1006 ntBASIC18.75■□□□□ 0.59
CHGBP05060 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.75■□□□□ 0.59
CHGBP05060 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.75■□□□□ 0.59
CHGBP05060 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.75■□□□□ 0.59
CHGBP05060 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.75■□□□□ 0.59
CHGBP05060 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.75■□□□□ 0.59
CHGBP05060 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.75■□□□□ 0.59
CHGBP05060 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.75■□□□□ 0.59
CHGBP05060 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.75■□□□□ 0.59
CHGBP05060 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
CHGBP05060 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms