Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.41□□□□□ -0.42
TRGV3P03979 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.41□□□□□ -0.42
TRGV3P03979 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.41□□□□□ -0.42
TRGV3P03979 AL590560.3-201ENST00000623350 461 ntBASIC12.41□□□□□ -0.42
TRGV3P03979 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRGV3P03979 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 AC087499.5-201ENST00000452760 1342 ntBASIC12.4□□□□□ -0.42
TRGV3P03979 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.4□□□□□ -0.42
TRGV3P03979 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.4□□□□□ -0.42
TRGV3P03979 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.4□□□□□ -0.42
TRGV3P03979 RNA5SP421-201ENST00000516864 134 ntBASIC12.4□□□□□ -0.42
TRGV3P03979 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TRGV3P03979 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.4□□□□□ -0.42
TRGV3P03979 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 AC005498.2-205ENST00000593218 784 ntBASIC12.4□□□□□ -0.42
TRGV3P03979 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV3P03979 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV3P03979 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV3P03979 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV3P03979 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV3P03979 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV3P03979 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV3P03979 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV3P03979 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV3P03979 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
TRGV3P03979 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms