Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 OR2I1P-210ENST00000642037 4691 ntBASIC15.28■□□□□ 0.04
KRT6AP02538 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 C18orf15-201ENST00000623680 2534 ntBASIC15.27■□□□□ 0.04
KRT6AP02538 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 AC112693.3-201ENST00000624819 1983 ntBASIC15.27■□□□□ 0.04
KRT6AP02538 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6AP02538 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6AP02538 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6AP02538 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
KRT6AP02538 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6AP02538 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT6AP02538 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6AP02538 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.27■□□□□ 0.04
KRT6AP02538 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT6AP02538 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT6AP02538 HNRNPUP1-201ENST00000554987 333 ntBASIC15.27■□□□□ 0.04
KRT6AP02538 MIR3687-2-201ENST00000577708 61 ntBASIC15.27■□□□□ 0.04
KRT6AP02538 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT6AP02538 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.27■□□□□ 0.04
KRT6AP02538 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT6AP02538 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.27■□□□□ 0.04
KRT6AP02538 MIR3687-1-201ENST00000614492 61 ntBASIC15.27■□□□□ 0.04
KRT6AP02538 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRT6AP02538 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.27■□□□□ 0.03
KRT6AP02538 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 AC009090.5-201ENST00000624886 2285 ntBASIC15.27■□□□□ 0.03
KRT6AP02538 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
KRT6AP02538 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6AP02538 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6AP02538 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 AL627223.1-201ENST00000416693 442 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 AC136604.1-201ENST00000418535 575 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6AP02538 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6AP02538 YBX1P5-201ENST00000509441 847 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 AC105021.1-202ENST00000570572 669 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 MIR4469-201ENST00000583919 79 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 AL671883.3-201ENST00000603274 991 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 AC097359.3-201ENST00000603982 1210 ntBASIC15.26■□□□□ 0.03
KRT6AP02538 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
KRT6AP02538 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms