Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBC1P01850 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBC1P01850 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 API5-211ENST00000534695 560 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.7■□□□□ 0.1
TRBC1P01850 AC190387.1-201ENST00000551683 408 ntBASIC15.7■□□□□ 0.1
TRBC1P01850 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBC1P01850 AC036164.1-201ENST00000570544 333 ntBASIC15.7■□□□□ 0.1
TRBC1P01850 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBC1P01850 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBC1P01850 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBC1P01850 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBC1P01850 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBC1P01850 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 AC087499.6-201ENST00000411576 835 ntBASIC15.69■□□□□ 0.1
TRBC1P01850 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBC1P01850 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBC1P01850 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 AC105917.1-201ENST00000506637 2539 ntBASIC15.69■□□□□ 0.1
TRBC1P01850 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBC1P01850 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBC1P01850 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBC1P01850 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBC1P01850 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBC1P01850 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBC1P01850 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRBC1P01850 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms