Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MT-CO1P00395 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-CO1P00395 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-CO1P00395 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-CO1P00395 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-CO1P00395 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.13■□□□□ 0.17
MT-CO1P00395 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 AL353779.1-201ENST00000434793 351 ntBASIC16.12■□□□□ 0.17
MT-CO1P00395 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-CO1P00395 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.12■□□□□ 0.17
MT-CO1P00395 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.12■□□□□ 0.17
MT-CO1P00395 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MT-CO1P00395 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MT-CO1P00395 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
MT-CO1P00395 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-CO1P00395 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MT-CO1P00395 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-CO1P00395 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MT-CO1P00395 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-CO1P00395 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-CO1P00395 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
MT-CO1P00395 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.11■□□□□ 0.17
MT-CO1P00395 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 DFFBP1-201ENST00000433250 979 ntBASIC16.11■□□□□ 0.17
MT-CO1P00395 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MT-CO1P00395 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
MT-CO1P00395 MIR4313-201ENST00000580760 101 ntBASIC16.11■□□□□ 0.17
MT-CO1P00395 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.11■□□□□ 0.17
MT-CO1P00395 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MT-CO1P00395 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 SLC7A15P-201ENST00000424028 1363 ntBASIC16.11■□□□□ 0.17
MT-CO1P00395 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-CO1P00395 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
MT-CO1P00395 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MT-CO1P00395 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-CO1P00395 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms