Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TOP3BO95985 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TOP3BO95985 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
TOP3BO95985 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.14■□□□□ 0.18
TOP3BO95985 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TOP3BO95985 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TOP3BO95985 AL133338.1-201ENST00000565695 1517 ntBASIC16.14■□□□□ 0.18
TOP3BO95985 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.14■□□□□ 0.17
TOP3BO95985 AC093724.1-201ENST00000448659 1027 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.14■□□□□ 0.17
TOP3BO95985 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 AC119751.2-201ENST00000504529 210 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.14■□□□□ 0.17
TOP3BO95985 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.14■□□□□ 0.17
TOP3BO95985 CHCHD2P3-201ENST00000603038 451 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 AC021097.1-201ENST00000607902 574 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.14■□□□□ 0.17
TOP3BO95985 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TOP3BO95985 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TOP3BO95985 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TOP3BO95985 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TOP3BO95985 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TOP3BO95985 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.13■□□□□ 0.17
TOP3BO95985 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.13■□□□□ 0.17
TOP3BO95985 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.13■□□□□ 0.17
TOP3BO95985 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 AC008494.3-201ENST00000606615 944 ntBASIC16.13■□□□□ 0.17
TOP3BO95985 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.13■□□□□ 0.17
TOP3BO95985 AC068587.10-201ENST00000641210 219 ntBASIC16.13■□□□□ 0.17
TOP3BO95985 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.13■□□□□ 0.17
TOP3BO95985 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.13■□□□□ 0.17
TOP3BO95985 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TOP3BO95985 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.13■□□□□ 0.17
TOP3BO95985 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TOP3BO95985 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TOP3BO95985 AC020658.6-201ENST00000623564 1870 ntBASIC16.12■□□□□ 0.17
TOP3BO95985 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms