Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 STUB1-204ENST00000564370 875 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 AP000593.2-201ENST00000542775 1433 ntBASIC22.98■■□□□ 1.27
RAPGEF3O95398 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 IDS-203ENST00000428056 1213 ntTSL 2 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 RPL8P2-201ENST00000430538 502 ntBASIC22.97■■□□□ 1.27
RAPGEF3O95398 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 KLF2P1-201ENST00000447438 1042 ntBASIC22.97■■□□□ 1.27
RAPGEF3O95398 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 AL031713.1-201ENST00000564813 661 ntBASIC22.97■■□□□ 1.27
RAPGEF3O95398 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 AL161773.1-201ENST00000624845 863 ntBASIC22.97■■□□□ 1.27
RAPGEF3O95398 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF3O95398 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC22.97■■□□□ 1.27
RAPGEF3O95398 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC22.96■■□□□ 1.27
RAPGEF3O95398 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC22.96■■□□□ 1.27
RAPGEF3O95398 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC22.96■■□□□ 1.27
RAPGEF3O95398 MEG3_2.1-201ENST00000611456 105 ntBASIC22.96■■□□□ 1.27
RAPGEF3O95398 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 FKBP4P6-201ENST00000457486 1332 ntBASIC22.96■■□□□ 1.27
RAPGEF3O95398 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC22.96■■□□□ 1.27
RAPGEF3O95398 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC22.96■■□□□ 1.27
RAPGEF3O95398 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF3O95398 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC22.96■■□□□ 1.27
RAPGEF3O95398 AL645608.8-201ENST00000606034 2086 ntBASIC22.96■■□□□ 1.27
RAPGEF3O95398 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 AL512430.1-201ENST00000392575 860 ntBASIC22.95■■□□□ 1.26
RAPGEF3O95398 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 POU5F1P2-201ENST00000521750 823 ntBASIC22.95■■□□□ 1.26
RAPGEF3O95398 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 MIR3677-201ENST00000578964 60 ntBASIC22.95■■□□□ 1.26
RAPGEF3O95398 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 AL109837.1-201ENST00000603272 613 ntBASIC22.95■■□□□ 1.26
RAPGEF3O95398 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC22.95■■□□□ 1.26
RAPGEF3O95398 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF3O95398 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms