Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
GPC4O75487 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.82■□□□□ 0.12
GPC4O75487 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.82■□□□□ 0.12
GPC4O75487 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GPC4O75487 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GPC4O75487 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 SPDYE7P-202ENST00000420373 878 ntBASIC15.81■□□□□ 0.12
GPC4O75487 AL353705.2-201ENST00000428243 662 ntBASIC15.81■□□□□ 0.12
GPC4O75487 AL136982.4-201ENST00000437689 1740 ntBASIC15.81■□□□□ 0.12
GPC4O75487 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 AL139010.1-201ENST00000454878 894 ntBASIC15.81■□□□□ 0.12
GPC4O75487 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC4O75487 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 SSR4P1-203ENST00000599569 2260 ntBASIC15.81■□□□□ 0.12
GPC4O75487 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 AC007967.4-201ENST00000614700 386 ntBASIC15.81■□□□□ 0.12
GPC4O75487 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC4O75487 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
GPC4O75487 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC4O75487 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.8■□□□□ 0.12
GPC4O75487 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GPC4O75487 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
GPC4O75487 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GPC4O75487 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.8■□□□□ 0.12
GPC4O75487 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.8■□□□□ 0.12
GPC4O75487 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.8■□□□□ 0.12
GPC4O75487 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.8■□□□□ 0.12
GPC4O75487 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 AC243562.2-201ENST00000561247 970 ntBASIC15.8■□□□□ 0.12
GPC4O75487 AC105021.1-202ENST00000570572 669 ntBASIC15.8■□□□□ 0.12
GPC4O75487 MIR4453-201ENST00000584019 89 ntBASIC15.8■□□□□ 0.12
GPC4O75487 AC026979.3-201ENST00000607315 403 ntBASIC15.8■□□□□ 0.12
GPC4O75487 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms