Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF40O75150 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF40O75150 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 TOP3BP1-201ENST00000420768 1380 ntBASIC17.06■□□□□ 0.32
RNF40O75150 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 AC063926.2-201ENST00000623766 1308 ntBASIC17.06■□□□□ 0.32
RNF40O75150 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 AL671710.1-201ENST00000610245 2349 ntBASIC17.06■□□□□ 0.32
RNF40O75150 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF40O75150 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF40O75150 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.06■□□□□ 0.32
RNF40O75150 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.06■□□□□ 0.32
RNF40O75150 AC091167.2-201ENST00000579581 588 ntBASIC17.06■□□□□ 0.32
RNF40O75150 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF40O75150 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF40O75150 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF40O75150 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF40O75150 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RNF40O75150 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 AL021920.2-201ENST00000624828 1351 ntBASIC17.05■□□□□ 0.32
RNF40O75150 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.05■□□□□ 0.32
RNF40O75150 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF40O75150 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF40O75150 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF40O75150 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 AC005225.4-201ENST00000557330 545 ntBASIC17.05■□□□□ 0.32
RNF40O75150 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.05■□□□□ 0.32
RNF40O75150 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF40O75150 AC020658.6-201ENST00000623564 1870 ntBASIC17.05■□□□□ 0.32
RNF40O75150 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF40O75150 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF40O75150 TMBIM7P-203ENST00000641617 1718 ntBASIC17.04■□□□□ 0.32
RNF40O75150 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF40O75150 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF40O75150 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF40O75150 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF40O75150 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF40O75150 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF40O75150 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF40O75150 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF40O75150 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF40O75150 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF40O75150 AC006277.1-201ENST00000624348 1610 ntBASIC17.04■□□□□ 0.32
RNF40O75150 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF40O75150 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms