Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
ZIC3O60481 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC3O60481 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC3O60481 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.07□□□□□ -0.16
ZIC3O60481 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC3O60481 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.07□□□□□ -0.16
ZIC3O60481 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZIC3O60481 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZIC3O60481 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.07□□□□□ -0.16
ZIC3O60481 AC025181.2-201ENST00000606994 802 ntBASIC14.07□□□□□ -0.16
ZIC3O60481 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.07□□□□□ -0.16
ZIC3O60481 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.07□□□□□ -0.16
ZIC3O60481 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 AC020658.6-201ENST00000623564 1870 ntBASIC14.07□□□□□ -0.16
ZIC3O60481 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.07□□□□□ -0.16
ZIC3O60481 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.07□□□□□ -0.16
ZIC3O60481 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZIC3O60481 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC3O60481 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.06□□□□□ -0.16
ZIC3O60481 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ZIC3O60481 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC3O60481 INE1-201ENST00000456273 945 ntBASIC14.06□□□□□ -0.16
ZIC3O60481 AC011495.1-201ENST00000498085 584 ntBASIC14.06□□□□□ -0.16
ZIC3O60481 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.06□□□□□ -0.16
ZIC3O60481 AC124283.3-201ENST00000570869 594 ntBASIC14.06□□□□□ -0.16
ZIC3O60481 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.06□□□□□ -0.16
ZIC3O60481 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 INTS4P2-202ENST00000614726 2019 ntBASIC14.06□□□□□ -0.16
ZIC3O60481 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC3O60481 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ZIC3O60481 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 AC063926.2-201ENST00000623766 1308 ntBASIC14.06□□□□□ -0.16
ZIC3O60481 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC3O60481 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.06□□□□□ -0.16
ZIC3O60481 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC3O60481 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
ZIC3O60481 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms