Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 LINC01115-203ENST00000606068 577 ntBASIC15.6■□□□□ 0.09
PCDHGA12O60330 AL022328.1-201ENST00000610050 478 ntBASIC15.6■□□□□ 0.09
PCDHGA12O60330 CU634019.7-201ENST00000624153 1185 ntBASIC15.6■□□□□ 0.09
PCDHGA12O60330 FP236241.2-201ENST00000624906 1185 ntBASIC15.6■□□□□ 0.09
PCDHGA12O60330 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA12O60330 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA12O60330 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 PDIA3P1-201ENST00000471856 1510 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 CTBP2P5-201ENST00000454986 1264 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 AL583810.1-201ENST00000553344 1045 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 MIR5189-201ENST00000577370 114 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 AC068418.2-201ENST00000577309 3703 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 AL691432.1-201ENST00000596308 1422 ntBASIC15.59■□□□□ 0.09
PCDHGA12O60330 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA12O60330 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA12O60330 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PCDHGA12O60330 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGA12O60330 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHGA12O60330 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGA12O60330 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PCDHGA12O60330 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHGA12O60330 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AC245100.5-201ENST00000452108 331 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 ENPP7P5-201ENST00000541031 1031 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 BRI3BPP1-201ENST00000594224 787 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 TUBB1P2-201ENST00000422712 1306 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 TUBB1P1-201ENST00000503144 1300 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms