Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LCMT2O60294 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
LCMT2O60294 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.02□□□□□ -0.01
LCMT2O60294 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCMT2O60294 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
LCMT2O60294 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.02□□□□□ -0.01
LCMT2O60294 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 AC087481.3-201ENST00000602886 1894 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 SPDYE19P-201ENST00000338590 713 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 AC236430.1-201ENST00000402231 743 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 SPTLC1P1-201ENST00000447199 261 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 DOC2GP-202ENST00000514950 1163 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 AC023310.3-201ENST00000557027 670 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 AC100756.1-201ENST00000562736 682 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 AC138749.3-201ENST00000567691 622 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.01□□□□□ -0.01
LCMT2O60294 LINC02560-201ENST00000596379 459 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 AC116165.1-201ENST00000611806 668 ntBASIC15.01□□□□□ -0.01
LCMT2O60294 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LCMT2O60294 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.01□□□□□ -0.01
LCMT2O60294 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCMT2O60294 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.01□□□□□ -0.01
LCMT2O60294 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 AC073347.1-201ENST00000421633 2643 ntBASIC15□□□□□ -0.01
LCMT2O60294 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 AC002472.2-201ENST00000442739 958 ntBASIC15□□□□□ -0.01
LCMT2O60294 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15□□□□□ -0.01
LCMT2O60294 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15□□□□□ -0.01
LCMT2O60294 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 MIR4745-201ENST00000577608 62 ntBASIC15□□□□□ -0.01
LCMT2O60294 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15□□□□□ -0.01
LCMT2O60294 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
LCMT2O60294 PPT1-215ENST00000641471 2368 ntBASIC15□□□□□ -0.01
LCMT2O60294 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms