Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCA5O60264 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SMARCA5O60264 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCA5O60264 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCA5O60264 ZNF890P-202ENST00000530367 1156 ntBASIC19.35■□□□□ 0.69
SMARCA5O60264 AC135586.1-201ENST00000539323 574 ntBASIC19.35■□□□□ 0.69
SMARCA5O60264 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCA5O60264 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SMARCA5O60264 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SMARCA5O60264 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCA5O60264 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCA5O60264 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCA5O60264 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCA5O60264 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 AC015922.1-201ENST00000421102 1152 ntBASIC19.34■□□□□ 0.69
SMARCA5O60264 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SMARCA5O60264 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.34■□□□□ 0.69
SMARCA5O60264 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.34■□□□□ 0.69
SMARCA5O60264 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.34■□□□□ 0.69
SMARCA5O60264 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.34■□□□□ 0.69
SMARCA5O60264 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.34■□□□□ 0.69
SMARCA5O60264 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMARCA5O60264 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCA5O60264 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCA5O60264 CICP11-201ENST00000434745 2827 ntBASIC19.33■□□□□ 0.69
SMARCA5O60264 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SMARCA5O60264 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.33■□□□□ 0.69
SMARCA5O60264 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCA5O60264 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCA5O60264 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCA5O60264 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
SMARCA5O60264 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMARCA5O60264 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 MIR770-201ENST00000390219 98 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms