Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.67□□□□□ -0.06
NTN3O00634 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NTN3O00634 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NTN3O00634 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NTN3O00634 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.67□□□□□ -0.06
NTN3O00634 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.67□□□□□ -0.06
NTN3O00634 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
NTN3O00634 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NTN3O00634 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NTN3O00634 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
NTN3O00634 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NTN3O00634 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.66□□□□□ -0.06
NTN3O00634 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.66□□□□□ -0.06
NTN3O00634 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.66□□□□□ -0.06
NTN3O00634 RNA5SP423-201ENST00000517127 109 ntBASIC14.66□□□□□ -0.06
NTN3O00634 AC022616.1-201ENST00000518688 554 ntBASIC14.66□□□□□ -0.06
NTN3O00634 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.66□□□□□ -0.06
NTN3O00634 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 RN7SL713P-201ENST00000582127 302 ntBASIC14.66□□□□□ -0.06
NTN3O00634 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.66□□□□□ -0.06
NTN3O00634 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.66□□□□□ -0.06
NTN3O00634 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.66□□□□□ -0.06
NTN3O00634 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.66□□□□□ -0.06
NTN3O00634 AL021578.1-201ENST00000613646 709 ntBASIC14.66□□□□□ -0.06
NTN3O00634 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NTN3O00634 AL662844.4-201ENST00000606367 2838 ntBASIC14.66□□□□□ -0.06
NTN3O00634 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NTN3O00634 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NTN3O00634 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.65□□□□□ -0.06
NTN3O00634 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 AC127383.1-201ENST00000444697 1800 ntBASIC14.65□□□□□ -0.06
NTN3O00634 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NTN3O00634 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.65□□□□□ -0.06
NTN3O00634 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 AC005077.2-201ENST00000449786 690 ntBASIC14.65□□□□□ -0.06
NTN3O00634 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 HIST2H2BC-201ENST00000498492 580 ntBASIC14.65□□□□□ -0.06
NTN3O00634 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.65□□□□□ -0.06
NTN3O00634 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.65□□□□□ -0.06
NTN3O00634 PPY2P-201ENST00000582808 702 ntBASIC14.65□□□□□ -0.06
NTN3O00634 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.65□□□□□ -0.06
NTN3O00634 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NTN3O00634 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NTN3O00634 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NTN3O00634 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.65□□□□□ -0.06
NTN3O00634 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NTN3O00634 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NTN3O00634 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms