Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CACNB4O00305 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CACNB4O00305 KRT8P22-201ENST00000562317 1415 ntBASIC15.5■□□□□ 0.07
CACNB4O00305 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CACNB4O00305 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CACNB4O00305 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CACNB4O00305 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
CACNB4O00305 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CACNB4O00305 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CACNB4O00305 OR8S1-201ENST00000310194 1080 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CACNB4O00305 AL133267.1-201ENST00000398220 340 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.49■□□□□ 0.07
CACNB4O00305 GPR53P-205ENST00000457298 1084 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.49■□□□□ 0.07
CACNB4O00305 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.49■□□□□ 0.07
CACNB4O00305 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.49■□□□□ 0.07
CACNB4O00305 AL049840.4-201ENST00000602422 811 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 AC000095.1-201ENST00000603208 874 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 CU634019.7-201ENST00000624153 1185 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 FP236241.2-201ENST00000624906 1185 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CACNB4O00305 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.49■□□□□ 0.07
CACNB4O00305 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 INTS4P2-202ENST00000614726 2019 ntBASIC15.49■□□□□ 0.07
CACNB4O00305 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CACNB4O00305 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CACNB4O00305 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.49■□□□□ 0.07
CACNB4O00305 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
CACNB4O00305 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.48■□□□□ 0.07
CACNB4O00305 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
CACNB4O00305 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.48■□□□□ 0.07
CACNB4O00305 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.48■□□□□ 0.07
CACNB4O00305 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
CACNB4O00305 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.48■□□□□ 0.07
CACNB4O00305 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CACNB4O00305 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.48■□□□□ 0.07
CACNB4O00305 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.48■□□□□ 0.07
CACNB4O00305 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CACNB4O00305 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CACNB4O00305 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CACNB4O00305 AC112504.1-201ENST00000623415 1841 ntBASIC15.47■□□□□ 0.07
CACNB4O00305 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CACNB4O00305 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.47■□□□□ 0.07
CACNB4O00305 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms