Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.22■□□□□ 0.67
RGPD3A6NKT7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 AL645933.1-201ENST00000440087 609 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 RN7SL396P-201ENST00000471086 295 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 AC008825.2-201ENST00000603374 718 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 AL138725.1-201ENST00000407347 1314 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 GCSHP3-201ENST00000431120 391 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 MIR6720-201ENST00000611664 98 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 AC018695.6-201ENST00000614011 534 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 INE2-201ENST00000630399 1874 ntBASIC19.21■□□□□ 0.67
RGPD3A6NKT7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.21■□□□□ 0.67
RGPD3A6NKT7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.21■□□□□ 0.66
RGPD3A6NKT7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 AC018629.1-201ENST00000623381 1736 ntBASIC19.2■□□□□ 0.66
RGPD3A6NKT7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 RN7SKP230-201ENST00000365642 335 ntBASIC19.2■□□□□ 0.66
RGPD3A6NKT7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.2■□□□□ 0.66
RGPD3A6NKT7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RGPD3A6NKT7 CYP4F23P-201ENST00000593402 1579 ntBASIC19.2■□□□□ 0.66
RGPD3A6NKT7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RGPD3A6NKT7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD3A6NKT7 AL807761.2-201ENST00000422849 729 ntBASIC19.19■□□□□ 0.66
RGPD3A6NKT7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD3A6NKT7 TSPY25P-201ENST00000429463 745 ntBASIC19.19■□□□□ 0.66
RGPD3A6NKT7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms