Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AC107918.4-201ENST00000641966 3141 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AC136604.1-201ENST00000418535 575 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PRYP6-201ENST00000514804 343 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SART3-203ENST00000546611 1184 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AC024267.1-201ENST00000582320 895 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 MTDHP3-201ENST00000594186 672 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AL009183.1-201ENST00000603760 355 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AL355877.3-201ENST00000622820 899 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 KRT8P37-201ENST00000451609 1420 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 KRT8P22-201ENST00000562317 1415 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 AC012508.2-201ENST00000567613 1472 ntBASIC11.06□□□□□ -0.64
LINC01546A6NGU7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01546A6NGU7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 OR2I1P-210ENST00000642037 4691 ntBASIC11.05□□□□□ -0.64
LINC01546A6NGU7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.05□□□□□ -0.64
LINC01546A6NGU7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 KRT18P57-201ENST00000443599 1254 ntBASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AC104076.2-201ENST00000448912 469 ntBASIC11.05□□□□□ -0.64
LINC01546A6NGU7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 AL121956.5-201ENST00000625261 221 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms