Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 AC016027.1-202ENST00000607927 1699 ntBASIC17.13■□□□□ 0.33
CCDC66A2RUB6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC66A2RUB6 AC006504.5-208ENST00000588784 2401 ntBASIC17.12■□□□□ 0.33
CCDC66A2RUB6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AC093724.1-201ENST00000448659 1027 ntBASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AC079781.3-201ENST00000449110 356 ntBASIC17.12■□□□□ 0.33
CCDC66A2RUB6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AC092910.1-201ENST00000482027 1129 ntBASIC17.12■□□□□ 0.33
CCDC66A2RUB6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 AL031008.1-201ENST00000619963 541 ntBASIC17.12■□□□□ 0.33
CCDC66A2RUB6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC66A2RUB6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC66A2RUB6 TMBIM7P-203ENST00000641617 1718 ntBASIC17.11■□□□□ 0.33
CCDC66A2RUB6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms