Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AL031719.1-201ENST00000623365 2587 ntBASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC026992.2-203ENST00000563004 2419 ntBASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SNX33P1-201ENST00000592116 1762 ntBASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 GPAA1P2-202ENST00000606848 1787 ntBASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 TPT1P11-201ENST00000458482 498 ntBASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 AL358933.1-201ENST00000565046 2830 ntBASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms