Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC006557.2-201ENST00000592985 1240 ntBASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 AC087386.2-201ENST00000623212 4637 ntBASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 ZBED1P1-201ENST00000502364 1930 ntBASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 INTS4P1-203ENST00000641008 3683 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 PMS2P4-201ENST00000412466 1052 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 LAGE3P1-201ENST00000425356 484 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 DUSP5P1-201ENST00000441325 1139 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 MIR4515-201ENST00000584082 81 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AL732292.2-201ENST00000609649 430 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 NPAP1P7-201ENST00000613027 823 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AL355877.3-201ENST00000622820 899 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AC018892.3-201ENST00000623986 2499 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RCL1Q9Y2P8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 HMGA1P7-201ENST00000406908 502 ntBASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms