Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 MIR6799-201ENST00000620297 69 ntBASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 AC148477.4-201ENST00000613430 1793 ntBASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 GHSR-202ENST00000427970 912 ntBASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 AC026954.1-201ENST00000429771 1293 ntBASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 AL355994.2-201ENST00000447882 704 ntBASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 AC006453.4-201ENST00000636949 1252 ntBASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPO2Q9UMS6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNPO2Q9UMS6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 FAM197Y7-201ENST00000432892 766 ntBASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms