Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC004987.2-201ENST00000395959 1148 ntBASIC13.35□□□□□ -0.27
CLN8Q9UBY8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SPDYE17-201ENST00000412399 783 ntBASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC004890.2-204ENST00000481968 304 ntBASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 MIR3197-201ENST00000582241 73 ntBASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC022144.1-201ENST00000602255 1580 ntBASIC13.35□□□□□ -0.27
CLN8Q9UBY8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AL136982.4-201ENST00000437689 1740 ntBASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 AL691432.1-201ENST00000596308 1422 ntBASIC13.34□□□□□ -0.27
CLN8Q9UBY8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 TSPY16P-201ENST00000449843 468 ntBASIC13.34□□□□□ -0.27
CLN8Q9UBY8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.34□□□□□ -0.27
CLN8Q9UBY8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms